[Bug 49000] update to 5.6 breaks libtool in usage of GNU autoconf ./configure

[WineHQ Bugzilla]

https://bugs.winehq.org/show_bug.cgi?id=49000

--- Comment #1 from Nikolay Sivov <bunglehead(a)gmail.com> ---
Are those paths generated with some program running with wine? There was a
regression recently, see bug 48937, maybe that's what you see. It's already
fixed in git.

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