[Bug 21522] New: DnaSP 5 crashes under wine if a "Tajima's test" is performed.

http://bugs.winehq.org/show_bug.cgi?id=21522

Summary: DnaSP 5 crashes under wine if a "Tajima's test" is
                    performed.
           Product: Wine
           Version: 1.1.37
          Platform: x86
        OS/Version: Linux
            Status: UNCONFIRMED
          Severity: normal
          Priority: P2
         Component: -unknown
        AssignedTo: [e-mail]
        ReportedBy: [e-mail]

Created an attachment (id=25923)
 --> (http://bugs.winehq.org/attachment.cgi?id=25923)
Error log from terminal

Running a "Tajima's test" in DnaSP 5.10 using a "sliding window" will cause a
crash.
The log is attached.
The program can be found in:

http://www.ub.edu/dnasp/

It seems to have been somewhat tested under wine, since there is feedback in
their page. There is, however, no AppDB test.

If any further info is required, please, don't hesitate to ask.

[Bug 21522] DnaSP 5 crashes under wine if a "Tajima's test" is performed.

http://bugs.winehq.org/show_bug.cgi?id=21522

Andrew Nguyen  changed:

What    |Removed                     |Added
----------------------------------------------------------------------------
  Attachment #25923|application/octet-stream    |text/plain
          mime type|                            |

[Bug 21522] DnaSP 5 crashes under wine if a "Tajima's test" is performed.

http://bugs.winehq.org/show_bug.cgi?id=21522

Austin English  changed:

What    |Removed                     |Added
----------------------------------------------------------------------------
          Component|-unknown                    |oleaut32

--- Comment #1 from Austin English   2010-01-28 14:25:02 ---
> PE	7e830000-7e8c2000	Export          oleaut32

Are you using native oleaut32?

[Bug 21522] DnaSP 5 crashes under wine if a "Tajima's test" is performed.

http://bugs.winehq.org/show_bug.cgi?id=21522

Austin English  changed:

What    |Removed                     |Added
----------------------------------------------------------------------------
          Component|oleaut32                    |-unknown

[Bug 21522] DnaSP 5 crashes under wine if a "Tajima's test" is performed.

http://bugs.winehq.org/show_bug.cgi?id=21522

Andrew Nguyen  changed:

What    |Removed                     |Added
----------------------------------------------------------------------------
           Keywords|                            |download
             Status|UNCONFIRMED                 |NEW
                URL|                            |http://scguy318.freeshell.o
                   |                            |rg/dnasp51000.msi
          Component|-unknown                    |oleaut32
     Ever Confirmed|0                           |1

--- Comment #2 from Andrew Nguyen   2010-01-28 15:20:46 ---
I can confirm the issue in wine-1.1.37-171-g2a07163. Using winetricks to
install dcom98 successfully works around the crash. I've uploaded a copy of the
installer (sha1sum 6897ada4d9d73b44038a97b74729d3b546bd1284) to my personal
account since the original site requires registration to access the download.

[Bug 21522] DnaSP 5 crashes under wine if a "Tajima's test" is performed.

http://bugs.winehq.org/show_bug.cgi?id=21522

--- Comment #3 from Andrew Nguyen   2010-01-28 15:21:34 ---
Created an attachment (id=25928)
 --> (http://bugs.winehq.org/attachment.cgi?id=25928)
DnaSP 5 crash backtrace

[Bug 21522] DnaSP 5 crashes under wine if a "Tajima's test" is performed.

http://bugs.winehq.org/show_bug.cgi?id=21522

--- Comment #4 from Nikolay Sivov   2010-01-28 15:24:26 ---
(In reply to comment #3)
> Created an attachment (id=25928)

--> (http://bugs.winehq.org/attachment.cgi?id=25928) [details]
> DnaSP 5 crash backtrace

Please attach another one with +variant and oleaut32 compiled without
optimization: -O0.

[Bug 21522] DnaSP 5 crashes under wine if a "Tajima's test" is performed.

http://bugs.winehq.org/show_bug.cgi?id=21522

--- Comment #5 from Andrew Nguyen   2010-01-28 16:33:39 ---
Created an attachment (id=25931)
 --> (http://bugs.winehq.org/attachment.cgi?id=25931)
DnaSP 5 +variant trace and crash backtrace (lzma compressed)

[Bug 21522] DnaSP 5 crashes under wine if a "Tajima's test" is performed.

http://bugs.winehq.org/show_bug.cgi?id=21522

--- Comment #6 from Francisco Pina Martins   2010-01-29 04:52:42 ---
> Are you using native oleaut32?

All the libs I'm using are builtin.

I can confirm that using winetricks to install dcom98 works around the problem
successfully.

I have also added an entry for DnaSP in the AppDB.

[Bug 21522] DnaSP 5 crashes under wine if a "Tajima's test" is performed.

http://bugs.winehq.org/show_bug.cgi?id=21522

--- Comment #7 from Francisco Pina Martins  2010-10-17 10:20:35 CDT ---
Tested with wine 1.3.5 in a clean wine prefix and appears to be fixed.
Can anyone confirm this?

[Bug 21522] DnaSP 5 crashes under wine if a "Tajima's test" is performed.

http://bugs.winehq.org/show_bug.cgi?id=21522

--- Comment #8 from Nikolay Sivov  2010-10-23 15:35:35 CDT ---
Looks like this is fixed by commit f73c8c4d42c03a886675c8824f16678522ed17a6.
Another case of wrong use of source and dest in VARIANT coercion.

Francisco, could you try to revert it to confirm a crash is back without this
fix?

[Bug 21522] DnaSP 5 crashes under wine if a "Tajima's test" is performed.

http://bugs.winehq.org/show_bug.cgi?id=21522

Nikolay Sivov  changed:

What    |Removed                     |Added
----------------------------------------------------------------------------
                 CC|                            |[e-mail]

--- Comment #9 from Nikolay Sivov  2010-10-23 15:43:48 CDT ---
*** Bug 20825 has been marked as a duplicate of this bug. ***

[Bug 21522] DnaSP 5 crashes under wine if a "Tajima's test" is performed.

http://bugs.winehq.org/show_bug.cgi?id=21522

--- Comment #10 from Francisco Pina Martins  2010-10-24 10:06:46 CDT ---
I've never done this before.
where can I find a good and up-to-date source for reverting the commit?
I suppose this is a good place to start?
http://wiki.winehq.org/GitWine
I'll report back as soon as I've managed to do it. It could take a while,
tough. I still have a lot to learn. =-)

[Bug 21522] DnaSP 5 crashes under wine if a "Tajima's test" is performed.

http://bugs.winehq.org/show_bug.cgi?id=21522

--- Comment #11 from Francisco Pina Martins  2010-10-24 11:16:15 CDT ---
OWO!
Was that quick or what?
Reverting commit f73c8c4d42c03a886675c8824f16678522ed17a6 and running DNAsp in
a clean wine prefix causes the crash again. I guess the culprit is found.
Just in case I missed something: the mentioned commit patched: 
file dlls/oleaut32/varformat.c

Can this be safely closed now?

[Bug 21522] DnaSP 5 crashes under wine if a "Tajima's test" is performed.

http://bugs.winehq.org/show_bug.cgi?id=21522

Nikolay Sivov  changed:

What    |Removed                     |Added
----------------------------------------------------------------------------
             Status|NEW                         |RESOLVED
         Resolution|                            |FIXED

--- Comment #12 from Nikolay Sivov  2010-10-24 13:19:34 CDT ---
Yes, I'm marking this fixed.

Thanks for testing, the point was to ensure that this particular commit was a
fix.

[Bug 21522] DnaSP 5 crashes under wine if a "Tajima's test" is performed.

http://bugs.winehq.org/show_bug.cgi?id=21522

--- Comment #13 from Francisco Pina Martins  2010-10-24 16:41:52 CDT ---
Glad I could be of help.
I learned a LOT in the process.

[Bug 21522] DnaSP 5 crashes under wine if a "Tajima's test" is performed.

http://bugs.winehq.org/show_bug.cgi?id=21522

Alexandre Julliard  changed:

What    |Removed                     |Added
----------------------------------------------------------------------------
             Status|RESOLVED                    |CLOSED

--- Comment #14 from Alexandre Julliard  2010-10-29 12:58:25 CDT ---
Closing bugs fixed in 1.3.6.